Agilent GeneSpring Confidently Better Bioinformatics Solutions
Contents
1. GC MS LC MS CE MS and ICP MS Recursive analysis a unique feature of GeneSpring MPP lets users easily re mine data sets based on preliminary data to improve the quality of statistical analysis results It s also easy to export an inclusion list for Q TOF MS MS analysis and re import the results into GeneSpring MPP Machine Learning tor your data With functionality for unsupervised classification without prior group assignments or supervised using pre classified groups analysis the software lets you e Quickly and easily discover differences between sample groups e Plot changing patterns of compound abundances over time e Develop useful multivariate models for class prediction Built in ID Browser for automated spectral library searches Converting entities into actual chemical compounds using Mass Profiler Professional is made easy using comparative techniques against public or private databases The software automatically annotates the entity list and projects the compound names onto any of the various visualization and pathway analysis tools Mass Profiler Professional includes an integrated ID Browser that mirrors MassHunter s qualitative analysis functionality to allow identification using e LC MS Personal Compound Database METLIN pesticides forensics e GC MS libraries NIST and Fiehn library e Empirical Formula Calculation using Agilent s Molecular Formula Generator MFG algorithm Order2. GLU TYR ALA ATCGTACCTGACy lACca 1 3 311 115 A BRO q TOIUDAYT ong onA UIO4 a TQDAADTIADDOITAATTION J orari CONFIDENTLY BETTER BIOINFORMATICS SOLUTIONS Sic a The Mealsurej of Confidence pr Agilent Technologies CONFIDENTLY BETTER software for Discovery Solutions tor Biologists Genespring provides powertul workflow driven statistical tools for intuitive visualization and data analysis Designed specifically for the needs of biologists Genespring offers an interactive computing environment that promotes investigation and enables understanding of data within a biological context Regarded as the gold standard in expression analysis Genespring allows you to quickly and reliably identity targets of interest that are both statistically and biologically meaningful As a biological analysis tool more than 400 technology types from microarray annotation to NGS genomes are prepackaged for use along with Gene Ontologies variant databases and curated pathways Genespring receives over 100 references per month in Google Scholar and has enabled thousands of researchers to turn biological measurement into biological insight Turning Measurement Into Discovery Integrated Analysis with Genespring s Pathway Tools By integrating multiple co
3. el gene identification Created for NGS Optimized for Sureselect Genespring NGS is specifically engineered for the large scale data analysis that is typical of NGS experiments including data management Interactive data exploration and intuitive data visualizations The quality metrics visualizations and reporting mechanisms in Genespring NGS have been developed and optimized with Sureselect in mind In fact the same analysis routines available in GeneSpring NGS are those used by Agilent s Sureselect team providing you with the best analysis solution for your sequencing data g enn LE G z1 iv Jt i d Apatcation Best in class analysis for NGS 1 Over ten years of Experience Genespring NGS is built upon the industry gold standard platform for bioanalytical 110 analysis bringing the same powerful statistics rich visualizations and biological E 1 QC Tousandsofuses Ggntextualizations to your NGS data that have enabled thousands of microarray 19008 S researchers around the world thousand references CONFIDENTLY BETTER Intuitive and Integrated Metabolomics and Proteomics GeneSpring MPP Genespring can analyze many different types of mass spectral data through integration with the Mass Profiler Professional MPP module including
4. ing Information GeneSpring offers best in class analysis for any type of research Available in four fully compatible versions GeneSpring allows endless data comparisons and validations e GeneSpring NGS for RNA Seg DNA Seg and SureSelect Target Enrichment e GeneSpring GX for micorarray gene expression exon MIRNA CNV and GWAS e GeneSpring MPP for mass spec based protein profiling and metabolite abundance e Genespring PA for canonical pathway analysis and machine generated network modeling The same powertul statistics rich visualizations and biological contextualizations are all available in every version including normalizations data quality control built in gene ontology and gene set analysis sample classifications and a Tully integrated analytical pathway module Most importantly GeneSpring delivers a full suite of applications built and designed especially for biologists allowing you to directly interact with your data Wwww genespring com For Research Use Only Not for use in diagnostic procedures This information is subject to change without notice Agilent Technologies Inc 2012 Published in USA February 2 2012 5990 9905EN Tha Meaisure of Confidenca Agile nt Tech nologies
5. mprehensive analyses trom genomics transcriptomics proteomics and metabolomics Studies researchers can generate a better depiction of the biological system leading to a more accurate and detailed understanding of the molecular pathways that underlie their system s emergent properties Genespring includes curated canonical and machine generated pathways for intuitive biological contextualization as well as network capabilities to allow researchers to quickly generate and dynamically explore phenotypic networks CONFIDENTLY BETTER The Gold Standard For Microarray Analysis GeneSpring G a va 1 a Easy to Use Wizard Driven Workflows With easy to use wizard driven workflows intuitive and interactive visualizations and built in pathway analysis 2 GeneSpring provides powerful statistical tools to put your data into a biological context rial a F E l gar i Intuitive Data Management Integrated Pathway Analysis Powerful Data Visualization With GeneSpring GX researchers can quickly and reliably identity statistically significant differentially expressed genes alternative splicing events miRNA expression and effects and genotype variants using Genespring s built in Gene Set Enrichment Analysis miRNA target prediction databases sample classifications and a full
6. y integrated analytical pathway module e A broad spectrum of data pre processing linear and non linear normalization methods e Probe or gene level expression analysis on all major microarray platforms including Agilent Affymetrix and Illumina e microRNA analysis and Identification of gene targets using integrated largetScan information e The ability to do correlative analysis on mRNA expression and miRNA data or splicing QPCR e Exon splicing analysis using t tests or multivariate splicing ANOVA and filtering for transcripts on splicing index e Genotyping GWAS and Copy Number experiment analysis e NCBI Gene Expression Omnibus Importer tool for expression datasets CONFIDENTLY BETTER Easily Analyze Your NGS Data GeneSpring NG You dont have to be a bioinformatics expert Easy to Use Wizard Driven Workflows a With GeneSpring NGS you can perform quality assessment I of SureSelect targeted DNA and RNA enrichment protocols ee with quality metrics plots and reports specially designed for the Sureselect platform 5 4 4 Y Quickly and reliably identify genomic targets of interest including SNPs InDels and chromosomal variations and translocations m Perform comparative gene expression and gene structure Integrated Pathway Analysis Powerful Data Visualization Interrogation including splicing analysis gene fusion events and nov
Download Pdf Manuals
Related Search
Agilent GeneSpring Confidently Better Bioinformatics Solutions